- Predicted Gene MLOC_65749
MLOC_65749 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 205.826 | 182.494 | 185.229 | 201.791 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 89.3121 | 30.5553 | 33.0603 | 45.7465 |
INF1 | Young developing inflorescences (5mm) | 93.4609 | 99.2538 | 87.1858 | 84.2535 |
INF2 | Developing inflorescences (1-1.5 cm) | 54.8844 | 71.6129 | 59.9282 | 74.322 |
ROO | Roots from the seedlings (10 cm shoot stage) | 134.902 | 148.442 | 127.288 | 188.623 |
NOD | Developing tillers at six leaf stage, 3rd internode | 82.2854 | 80.3157 | 45.5998 | 273.976 |
CAR5 | Developing grain, bracts removed (5 DPA) | 164.204 | 169.989 | 162.607 | 174.334 |
CAR15 | Developing grain, bracts removed (15 DPA) | 128.105 | 124.806 | 113.421 | 308.633 |
CDS Structure of MLOC_65749
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65749.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g13810.1 |
+2 |
0.0 |
976 |
489/542 (90%) |
13106.m01523 protein pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed |
TAIR PP10 |
AT1G12000.1 |
+2 |
0.0 |
888 |
445/541 (82%) |
Phosphofructokinase family protein | chr1:4050159-4053727 REVERSE LENGTH=566 |