MLOC_65740 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.93419.47499.2448711.1099
LEAShoots from the seedlings (10 cm shoot stage)5.393680.373231.095541.93247
INF1Young developing inflorescences (5mm)29.083427.716223.597526.9174
INF2Developing inflorescences (1-1.5 cm)18.387932.045221.484534.0118
ROORoots from the seedlings (10 cm shoot stage)3.981597.628498.0401610.6044
NODDeveloping tillers at six leaf stage, 3rd internode0.1195090.1101950.02641810.346751
CAR5Developing grain, bracts removed (5 DPA)7.83719.1325610.065711.2473
CAR15Developing grain, bracts removed (15 DPA)0.3816010.2221740.5511841.00222



CDS Structure of MLOC_65740






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65740.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65740.3CUST_14882_PI427708080AvailableAvailablecontig_50603 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g42660.1 -2 1e-61 209 201/388 (52%) 13110.m04013 protein expressed protein
TAIR PP10 AT5G66230.1 -2 3e-25 106 133/366 (36%) Chalcone-flavanone isomerase family protein | chr5:26462704-26463873 FORWARD LENGTH=329