MLOC_65731 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.181516.613817.787415.3839
LEAShoots from the seedlings (10 cm shoot stage)21.880524.452424.521418.9158
INF1Young developing inflorescences (5mm)11.163510.41679.506518.26341
INF2Developing inflorescences (1-1.5 cm)13.073713.287814.70213.7304
ROORoots from the seedlings (10 cm shoot stage)25.363627.848222.10629.628
NODDeveloping tillers at six leaf stage, 3rd internode21.908230.882527.266291.2332
CAR5Developing grain, bracts removed (5 DPA)13.137513.065914.994412.1578
CAR15Developing grain, bracts removed (15 DPA)2.821612.754723.148125.95527



CDS Structure of MLOC_65731






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65731.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365738NoneNoneNoneNone
MLOC_65731.1CUST_5219_PI427708080AvailableAvailablecontig_50589 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01360.2 +1 0.0 590 363/503 (72%) 13108.m00054 protein RING finger protein 13, putative, expressed
TAIR PP10 AT1G71980.1 +1 4e-115 360 220/418 (53%) Protease-associated (PA) RING/U-box zinc finger family protein | chr1:27098250-27099881 FORWARD LENGTH=448