MLOC_6573 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.1770928.855524.04060
LEAShoots from the seedlings (10 cm shoot stage)35.709432.794723.14530
INF1Young developing inflorescences (5mm)30.440230.428327.1760
INF2Developing inflorescences (1-1.5 cm)39.522542.599634.35260
ROORoots from the seedlings (10 cm shoot stage)6.7429720.925515.80150
NODDeveloping tillers at six leaf stage, 3rd internode15.177618.813716.40750
CAR5Developing grain, bracts removed (5 DPA)33.600429.964532.38160
CAR15Developing grain, bracts removed (15 DPA)16.262214.65315.30850



CDS Structure of MLOC_6573






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364088
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364088CUST_20829_PI427708080NoneNoneNone
MLOC_16534.3NoneAvailableAvailablecontig_1573630 (Mapped)
MLOC_37909.3NoneAvailableNonecontig_2549334 (Mapped)
MLOC_38238.3NoneAvailableNonecontig_2550009 (Mapped)
MLOC_39937.1NoneAvailableNonecontig_2555544 (Not mapped)
MLOC_6573.1NoneAvailableNonecontig_137745 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----