MLOC_65725 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.880115.738718.028516.3852
LEAShoots from the seedlings (10 cm shoot stage)20.548127.077520.730816.5409
INF1Young developing inflorescences (5mm)5.981895.406048.160695.59545
INF2Developing inflorescences (1-1.5 cm)1.466591.052282.885921.80296
ROORoots from the seedlings (10 cm shoot stage)41.26122.325520.389722.97
NODDeveloping tillers at six leaf stage, 3rd internode64.790575.5361101.563184.449
CAR5Developing grain, bracts removed (5 DPA)6.294425.979335.438295.66097
CAR15Developing grain, bracts removed (15 DPA)2.411542.596821.866655.8225



CDS Structure of MLOC_65725






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65725.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366270NoneNoneNoneNone
MLOC_65725.1CUST_5217_PI427708080AvailableAvailablecontig_50581 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g33390.1 -2 0.0 696 365/423 (86%) 13104.m03216 protein prephenate dehydratase domain containing protein, expressed
TAIR PP10 AT1G08250.1 -2 0.0 564 297/413 (72%) | Symbols: ADT6 | arogenate dehydratase 6 | chr1:2588994-2590235 REVERSE LENGTH=413