MLOC_65714 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0480484000.0352567
LEAShoots from the seedlings (10 cm shoot stage)0.0622625000.0571777
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.8713891.317211.170951.33169
CAR15Developing grain, bracts removed (15 DPA)0.02984810.068725800.179704



CDS Structure of MLOC_65714






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65714.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65714.1CUST_14880_PI427708080AvailableAvailablecontig_50566 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48550.1 -3 8e-88 271 140/222 (63%) 13107.m05202 protein no apical meristem protein, putative, expressed
TAIR PP10 AT5G18270.2 -3 6e-73 233 118/209 (56%) | Symbols: ANAC087 | Arabidopsis NAC domain containing protein 87 | chr5:6041241-6042743 REVERSE LENGTH=335