MLOC_65713 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.06091770.20011700.210389
LEAShoots from the seedlings (10 cm shoot stage)0.5992540.4657150.2534880.370589
INF1Young developing inflorescences (5mm)0.04246390.04786200.0427234
INF2Developing inflorescences (1-1.5 cm)00.150440.1467410.167254
ROORoots from the seedlings (10 cm shoot stage)00.3301580.291970.524152
NODDeveloping tillers at six leaf stage, 3rd internode00.0074449800.0619962
CAR5Developing grain, bracts removed (5 DPA)0.6281770.376180.5175820.509636
CAR15Developing grain, bracts removed (15 DPA)0.03870600.05681510.103794



CDS Structure of MLOC_65713






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65713.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65713.1CUST_14879_PI427708080AvailableAvailablecontig_50560 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g01540.1 -3 1e-70 224 115/153 (75%) 13111.m00068 protein conserved hypothetical protein
TAIR PP10 AT1G07060.1 -3 1e-27 110 67/145 (46%) unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:2167138-2168397 REVERSE LENGTH=233