MLOC_65709 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.296821.048320.7077921.03359
LEAShoots from the seedlings (10 cm shoot stage)0.4177580.7389290.7110570.505019
INF1Young developing inflorescences (5mm)0.7029811.393710.6096070.830248
INF2Developing inflorescences (1-1.5 cm)0.4944721.061680.5436450.8948
ROORoots from the seedlings (10 cm shoot stage)0.2900010.6107820.9248960.707171
NODDeveloping tillers at six leaf stage, 3rd internode0.1795470.1726350.09735940.467655
CAR5Developing grain, bracts removed (5 DPA)1.368791.66231.525651.66857
CAR15Developing grain, bracts removed (15 DPA)0.1186150.1396370.08677730.326837



CDS Structure of MLOC_65709






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65709.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363302NoneNoneNoneNone
MLOC_65709.4CUST_5214_PI427708080AvailableAvailablecontig_50554 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g08230.1 -1 5e-31 101 92/127 (72%) 13108.m00855 protein kinesin-like protein, identical, putative, expressed
TAIR PP10None-----