MLOC_65700 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains77.30971.423171.271667.1903
LEAShoots from the seedlings (10 cm shoot stage)131.2394.603688.287575.524
INF1Young developing inflorescences (5mm)86.814377.614986.808271.0946
INF2Developing inflorescences (1-1.5 cm)131.014165.756191.674170.924
ROORoots from the seedlings (10 cm shoot stage)13.460634.043634.707129.6869
NODDeveloping tillers at six leaf stage, 3rd internode5.5842913.41016.2800525.066
CAR5Developing grain, bracts removed (5 DPA)173.858177.093158.899159.329
CAR15Developing grain, bracts removed (15 DPA)14.17167.765118.975331.1819



CDS Structure of MLOC_65700






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65700.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356678NoneNoneNoneNone
MLOC_65700.1CUST_18324_PI427708080AvailableAvailablecontig_50542 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g08360.1 +3 0.0 900 479/506 (95%) 13103.m00960 protein 3-ketoacyl-CoA synthase 10, putative, expressed
TAIR PP10 AT2G26250.1 +3 0.0 699 359/510 (70%) | Symbols: FDH, KCS10 | 3-ketoacyl-CoA synthase 10 | chr2:11170799-11173059 REVERSE LENGTH=550