MLOC_65690 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains40.73465.046859.588653.8666
LEAShoots from the seedlings (10 cm shoot stage)64.94246.774144.282543.313
INF1Young developing inflorescences (5mm)47.214151.818346.947138.2331
INF2Developing inflorescences (1-1.5 cm)50.242864.125154.815959.2114
ROORoots from the seedlings (10 cm shoot stage)41.834370.136947.431572.82
NODDeveloping tillers at six leaf stage, 3rd internode91.806881.057946.5125252.504
CAR5Developing grain, bracts removed (5 DPA)128.78124.484128.718116.241
CAR15Developing grain, bracts removed (15 DPA)42.896239.911242.495886.7968



CDS Structure of MLOC_65690






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65690.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371727NoneNoneNoneNone
MLOC_65690.1CUST_5211_PI427708080AvailableAvailablecontig_50522 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12590.1 +1 0.0 1572 837/897 (93%) 13103.m01442 protein coatomer subunit gamma-1, putative, expressed
TAIR PP10 AT4G34450.1 +1 0.0 1317 691/887 (78%) coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | chr4:16471956-16476795 FORWARD LENGTH=886