MLOC_6568 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.19504 | 10.1179 | 9.6194 | 8.39426 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.9141 | 20.4974 | 19.4856 | 13.4642 |
| INF1 | Young developing inflorescences (5mm) | 4.17714 | 3.80896 | 4.55985 | 3.44935 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.37328 | 3.98322 | 3.56927 | 3.80324 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.5139 | 13.5421 | 12.082 | 13.2357 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.7368 | 17.9873 | 17.0039 | 44.6837 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.44765 | 8.51542 | 8.42029 | 7.66087 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.3867 | 18.0734 | 13.9551 | 38.2712 |
CDS Structure of MLOC_6568
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6568.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g13040.1 |
+2 |
0.0 |
669 |
339/386 (88%) |
13103.m01509 protein haemolysin-III, putative, expressed |
| TAIR PP10 |
AT4G37680.2 |
+2 |
0.0 |
545 |
264/374 (71%) |
| Symbols: HHP4 | heptahelical protein 4 | chr4:17701231-17702568 FORWARD LENGTH=385 |
