MLOC_65674 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.885684.815835.339464.67905
LEAShoots from the seedlings (10 cm shoot stage)5.780026.26246.224584.58362
INF1Young developing inflorescences (5mm)34.687738.012749.053634.842
INF2Developing inflorescences (1-1.5 cm)22.616328.494332.426729.0247
ROORoots from the seedlings (10 cm shoot stage)31.686334.697123.642532.8199
NODDeveloping tillers at six leaf stage, 3rd internode3.541232.763953.230416.76263
CAR5Developing grain, bracts removed (5 DPA)2.942842.757212.327832.47492
CAR15Developing grain, bracts removed (15 DPA)1.199970.6886281.371232.51674



CDS Structure of MLOC_65674






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65674.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364568NoneNoneNoneNone
MLOC_65674.2CUST_5209_PI427708080AvailableAvailablecontig_50507 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g50160.1 -1 3e-40 142 76/98 (78%) 13103.m05456 protein plastocyanin-like domain containing protein, putative, expressed
TAIR PP10 AT2G02850.1 -1 2e-24 98 45/96 (47%) | Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129