- Predicted Gene MLOC_65618
MLOC_65618 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 12.8638 | 14.6458 | 14.8061 | 17.5414 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.1549 | 2.3835 | 1.14225 | 1.84597 |
INF1 | Young developing inflorescences (5mm) | 0.608672 | 0.541089 | 0.922418 | 0.687986 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.7663 | 7.71679 | 8.12863 | 9.07265 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.7373 | 24.9474 | 18.1 | 35.626 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.99942 | 6.86541 | 10.5963 | 27.4008 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.5807 | 10.7869 | 12.5474 | 14.0348 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.60828 | 6.00485 | 5.02704 | 16.5779 |
CDS Structure of MLOC_65618
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65618.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g03610.1 |
-2 |
0.0 |
857 |
447/605 (74%) |
13105.m00352 protein phospholipase C, putative, expressed |
TAIR PP10 |
AT3G08510.2 |
-2 |
0.0 |
608 |
318/590 (54%) |
| Symbols: ATPLC2, PLC2 | phospholipase C 2 | chr3:2582626-2585556 REVERSE LENGTH=581 |