MLOC_65618 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.863814.645814.806117.5414
LEAShoots from the seedlings (10 cm shoot stage)2.15492.38351.142251.84597
INF1Young developing inflorescences (5mm)0.6086720.5410890.9224180.687986
INF2Developing inflorescences (1-1.5 cm)4.76637.716798.128639.07265
ROORoots from the seedlings (10 cm shoot stage)18.737324.947418.135.626
NODDeveloping tillers at six leaf stage, 3rd internode8.999426.8654110.596327.4008
CAR5Developing grain, bracts removed (5 DPA)11.580710.786912.547414.0348
CAR15Developing grain, bracts removed (15 DPA)6.608286.004855.0270416.5779



CDS Structure of MLOC_65618






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65618.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365018NoneNoneNoneNone
MLOC_65618.1CUST_5199_PI427708080AvailableAvailablecontig_50442 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g03610.1 -2 0.0 857 447/605 (74%) 13105.m00352 protein phospholipase C, putative, expressed
TAIR PP10 AT3G08510.2 -2 0.0 608 318/590 (54%) | Symbols: ATPLC2, PLC2 | phospholipase C 2 | chr3:2582626-2585556 REVERSE LENGTH=581