- Predicted Gene MLOC_65546
MLOC_65546 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.33642 | 3.88786 | 3.21315 | 3.41515 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.8214 | 18.9393 | 26.6511 | 16.1693 |
| INF1 | Young developing inflorescences (5mm) | 3.3679 | 3.99585 | 4.09763 | 3.13732 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.08178 | 4.47111 | 5.05006 | 5.86255 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.07169 | 0.872736 | 0.329358 | 0.913842 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.8879 | 20.8008 | 25.591 | 56.8096 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.80298 | 6.83477 | 7.3484 | 7.4659 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.54216 | 1.24601 | 1.34705 | 5.61878 |
CDS Structure of MLOC_65546
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65546.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g35810.1 |
+3 |
1e-93 |
296 |
170/232 (73%) |
13110.m03231 protein thylakoid lumenal protein, putative, expressed |
| TAIR PP10 |
AT5G53490.2 |
+3 |
4e-83 |
268 |
130/157 (83%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:21723488-21724621 REVERSE LENGTH=235 |