MLOC_65544 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains33.710225.841425.570727.2567
LEAShoots from the seedlings (10 cm shoot stage)32.574410.356116.767615.4096
INF1Young developing inflorescences (5mm)45.016737.202243.987236.521
INF2Developing inflorescences (1-1.5 cm)15.251814.958718.98317.7983
ROORoots from the seedlings (10 cm shoot stage)27.163319.20117.154620.2747
NODDeveloping tillers at six leaf stage, 3rd internode26.673215.813522.520439.7207
CAR5Developing grain, bracts removed (5 DPA)23.506321.42523.169222.1643
CAR15Developing grain, bracts removed (15 DPA)1.530271.28951.241383.41749



CDS Structure of MLOC_65544






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65544.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364945NoneNoneNoneNone
MLOC_65544.2CUST_5189_PI427708080AvailableAvailablecontig_50316 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g54890.1 +3 0.0 778 414/436 (95%) 13102.m06287 protein UDP-glucuronate 4-epimerase, putative, expressed
TAIR PP10 AT4G30440.1 +3 0.0 684 349/436 (80%) | Symbols: GAE1 | UDP-D-glucuronate 4-epimerase 1 | chr4:14881976-14883265 REVERSE LENGTH=429