MLOC_65534 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.717927.406327.076726.1767
LEAShoots from the seedlings (10 cm shoot stage)14.702210.772313.613510.724
INF1Young developing inflorescences (5mm)13.65915.473416.522412.2674
INF2Developing inflorescences (1-1.5 cm)11.355112.47789.3027812.3124
ROORoots from the seedlings (10 cm shoot stage)15.113320.075318.594522.4537
NODDeveloping tillers at six leaf stage, 3rd internode21.033916.062115.632451.9115
CAR5Developing grain, bracts removed (5 DPA)12.797813.907113.34712.9912
CAR15Developing grain, bracts removed (15 DPA)2.548092.334592.740935.80722



CDS Structure of MLOC_65534






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65534.7
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371979NoneNoneNoneNone
MLOC_65534.7CUST_5188_PI427708080AvailableAvailablecontig_50306 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g09720.1 +1 0.0 896 453/557 (81%) 13107.m00982 protein phosphoacetylglucosamine mutase, putative, expressed
TAIR PP10 AT5G18070.1 +1 0.0 637 328/556 (59%) | Symbols: DRT101 | phosphoglucosamine mutase-related | chr5:5981117-5982787 FORWARD LENGTH=556