MLOC_65527 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.353314.69384.205363.97995
LEAShoots from the seedlings (10 cm shoot stage)11.63411.850919.800111.3538
INF1Young developing inflorescences (5mm)34.610318.249311.035717.5121
INF2Developing inflorescences (1-1.5 cm)2.926881.9644910.94384.29199
ROORoots from the seedlings (10 cm shoot stage)6.091377.66788.975388.10804
NODDeveloping tillers at six leaf stage, 3rd internode5.231955.964361.0160915.4535
CAR5Developing grain, bracts removed (5 DPA)7.746742.986771.705153.75685
CAR15Developing grain, bracts removed (15 DPA)5.793836.31625.7927311.8023



CDS Structure of MLOC_65527






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65527.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65527.4CUST_14841_PI427708080AvailableAvailablecontig_50300 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g36110.1 -1 0.0 743 417/698 (60%) 13112.m03703 protein calmodulin binding protein, putative, expressed
TAIR PP10 AT2G18750.3 -1 5e-55 204 128/340 (38%) Calmodulin-binding protein | chr2:8125827-8128363 FORWARD LENGTH=622