MLOC_65526 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.855495.566654.526594.61961
LEAShoots from the seedlings (10 cm shoot stage)2.308060.5221890.7934041.07147
INF1Young developing inflorescences (5mm)11.905112.222110.14529.28794
INF2Developing inflorescences (1-1.5 cm)10.988715.679.7037913.9936
ROORoots from the seedlings (10 cm shoot stage)0.7718572.329831.478712.50242
NODDeveloping tillers at six leaf stage, 3rd internode1.387371.07770.2607813.28855
CAR5Developing grain, bracts removed (5 DPA)7.999528.259548.431978.07783
CAR15Developing grain, bracts removed (15 DPA)0.6324520.4288271.074351.43719



CDS Structure of MLOC_65526






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65526.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65526.2CUST_14840_PI427708080AvailableAvailablecontig_50300 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g36100.1 +3 0.0 1284 692/988 (70%) 13112.m03702 protein kinesin-4, putative, expressed
TAIR PP10 AT2G47500.1 +3 0.0 865 461/763 (60%) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr2:19493247-19497882 FORWARD LENGTH=983