- Predicted Gene MLOC_65487
MLOC_65487 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.945413 | 0.625296 | 0.481671 | 0.738358 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.280663 | 0 | 0 | 0.259845 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.492717 | 0.347813 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.3603 | 15.082 | 12.6159 | 15.813 |
CAR15 | Developing grain, bracts removed (15 DPA) | 176.873 | 162.452 | 209.474 | 509.701 |
CDS Structure of MLOC_65487
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65487.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g10310.3 |
-1 |
3e-50 |
163 |
88/127 (69%) |
13105.m01107 protein acid phosphatase, putative, expressed |
TAIR PP10 |
AT4G29270.1 |
-1 |
2e-24 |
97 |
39/85 (46%) |
HAD superfamily, subfamily IIIB acid phosphatase | chr4:14423797-14424848 REVERSE LENGTH=256 |