MLOC_65478 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.311876.351117.199266.37637
LEAShoots from the seedlings (10 cm shoot stage)10.74510.048610.82988.44802
INF1Young developing inflorescences (5mm)8.588377.065847.303936.10986
INF2Developing inflorescences (1-1.5 cm)10.92489.66389.8842110.2269
ROORoots from the seedlings (10 cm shoot stage)11.317212.485212.229413.4226
NODDeveloping tillers at six leaf stage, 3rd internode6.300017.354846.5543422.1124
CAR5Developing grain, bracts removed (5 DPA)7.29668.498337.36066.81315
CAR15Developing grain, bracts removed (15 DPA)1.659861.381471.209023.17515



CDS Structure of MLOC_65478






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65478.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249447.1NoneNoneNoneNone
MLOC_65478.1CUST_5181_PI427708080AvailableAvailablecontig_50245 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g22600.1 -1 0.0 550 279/307 (91%) 13101.m02396 protein mitochondrial carrier protein, putative, expressed
TAIR PP10 AT5G15640.1 -1 1e-104 322 163/304 (54%) Mitochondrial substrate carrier family protein | chr5:5087590-5089677 FORWARD LENGTH=323