- Predicted Gene MLOC_65477
MLOC_65477 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 27.8888 | 22.595 | 20.0166 | 22.2993 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.6091 | 12.3985 | 26.4814 | 13.0526 |
INF1 | Young developing inflorescences (5mm) | 0.393244 | 0.117902 | 0.246488 | 0.219671 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.15127 | 0.125647 | 0.329817 | 0.212761 |
ROO | Roots from the seedlings (10 cm shoot stage) | 113.41 | 98.5846 | 66.9862 | 96.9576 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.26385 | 2.5259 | 3.77605 | 6.84968 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.81263 | 1.9291 | 1.92942 | 2.2148 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.177217 | 0.214519 | 0.158912 | 0.470859 |
CDS Structure of MLOC_65477
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65477.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g59150.1 |
-1 |
7e-142 |
417 |
208/315 (66%) |
13104.m06232 protein peroxidase precursor, putative, expressed |
TAIR PP10 |
AT1G71695.1 |
-1 |
4e-91 |
286 |
149/300 (50%) |
Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358 |