MLOC_65477 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.888822.59520.016622.2993
LEAShoots from the seedlings (10 cm shoot stage)12.609112.398526.481413.0526
INF1Young developing inflorescences (5mm)0.3932440.1179020.2464880.219671
INF2Developing inflorescences (1-1.5 cm)0.151270.1256470.3298170.212761
ROORoots from the seedlings (10 cm shoot stage)113.4198.584666.986296.9576
NODDeveloping tillers at six leaf stage, 3rd internode2.263852.52593.776056.84968
CAR5Developing grain, bracts removed (5 DPA)2.812631.92911.929422.2148
CAR15Developing grain, bracts removed (15 DPA)0.1772170.2145190.1589120.470859



CDS Structure of MLOC_65477






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65477.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353596NoneNoneNoneNone
MLOC_65477.1CUST_5180_PI427708080AvailableAvailablecontig_50241 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g59150.1 -1 7e-142 417 208/315 (66%) 13104.m06232 protein peroxidase precursor, putative, expressed
TAIR PP10 AT1G71695.1 -1 4e-91 286 149/300 (50%) Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358