MLOC_65475 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.450816.524418.187515.8026
LEAShoots from the seedlings (10 cm shoot stage)31.441834.37436.483228.4217
INF1Young developing inflorescences (5mm)20.358320.053623.393517.8409
INF2Developing inflorescences (1-1.5 cm)33.395726.869331.985332.9097
ROORoots from the seedlings (10 cm shoot stage)17.82420.536817.749522.997
NODDeveloping tillers at six leaf stage, 3rd internode19.40722.890630.798478.5721
CAR5Developing grain, bracts removed (5 DPA)22.405621.349422.966621.4728
CAR15Developing grain, bracts removed (15 DPA)17.572516.943417.436839.3645



CDS Structure of MLOC_65475






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65475.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248998.1NoneNoneNoneNone
MLOC_65475.4CUST_5179_PI427708080AvailableAvailablecontig_50239 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g04330.2 -3 1e-47 176 115/303 (38%) 13106.m00387 protein expressed protein
TAIR PP10None-----