MLOC_65442 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.074095.520595.685445.86256
LEAShoots from the seedlings (10 cm shoot stage)1.454380.3459120.6237660.687168
INF1Young developing inflorescences (5mm)11.334111.328812.74110.7421
INF2Developing inflorescences (1-1.5 cm)8.0972510.52328.0860910.351
ROORoots from the seedlings (10 cm shoot stage)4.679813.850355.022664.69687
NODDeveloping tillers at six leaf stage, 3rd internode0.4545480.2872190.3798940.84561
CAR5Developing grain, bracts removed (5 DPA)5.243074.282775.391824.93885
CAR15Developing grain, bracts removed (15 DPA)1.685161.697981.436114.14818



CDS Structure of MLOC_65442






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65442.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65442.3CUST_14831_PI427708080AvailableAvailablecontig_50186 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g43164.1 -1 0.0 647 329/436 (75%) 13104.m04279 protein expressed protein
TAIR PP10 AT4G13330.1 -1 1e-105 326 183/410 (45%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:7754248-7755837 REVERSE LENGTH=428