MLOC_65439 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.554613.805416.156315.4773
LEAShoots from the seedlings (10 cm shoot stage)10.56116.785119.243712.9612
INF1Young developing inflorescences (5mm)0.7688981.01131.036910.887316
INF2Developing inflorescences (1-1.5 cm)0.948920.8229650.9320851.06437
ROORoots from the seedlings (10 cm shoot stage)9.528278.187315.747839.29146
NODDeveloping tillers at six leaf stage, 3rd internode7.404729.272062.0406521.3578
CAR5Developing grain, bracts removed (5 DPA)53.486654.26455.632758.698
CAR15Developing grain, bracts removed (15 DPA)2.852713.09793.016117.82213



CDS Structure of MLOC_65439






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65439.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374502NoneNoneNoneNone
MLOC_65439.1CUST_5176_PI427708080AvailableAvailablecontig_50183 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g42310.1 +1 0.0 811 380/440 (86%) 13102.m04678 protein OsSCP8 - Putative Serine Carboxypeptidase homologue, expressed
TAIR PP10 AT5G23210.1 +1 0.0 615 287/448 (64%) | Symbols: SCPL34 | serine carboxypeptidase-like 34 | chr5:7810892-7814837 FORWARD LENGTH=499