MLOC_65434 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.692410.33819.72538.69026
LEAShoots from the seedlings (10 cm shoot stage)12.240816.840417.35711.4486
INF1Young developing inflorescences (5mm)4.879963.954345.01743.55072
INF2Developing inflorescences (1-1.5 cm)4.835975.131615.546484.95369
ROORoots from the seedlings (10 cm shoot stage)12.335514.733111.758813.7811
NODDeveloping tillers at six leaf stage, 3rd internode11.933513.192212.532835.1514
CAR5Developing grain, bracts removed (5 DPA)6.267335.837936.416765.08852
CAR15Developing grain, bracts removed (15 DPA)6.519246.02646.1213612.934



CDS Structure of MLOC_65434






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65434.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250076.1NoneNoneNoneNone
MLOC_65434.2CUST_18321_PI427708080AvailableAvailablecontig_50116 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g59450.1 -3 0.0 781 410/469 (87%) 13103.m06526 protein transporter-related, putative, expressed
TAIR PP10 AT4G36790.1 -3 0.0 556 290/448 (65%) Major facilitator superfamily protein | chr4:17336360-17338304 FORWARD LENGTH=489