MLOC_65431 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.50538.5430510.0719.62396
LEAShoots from the seedlings (10 cm shoot stage)4.357371.299992.50352.13594
INF1Young developing inflorescences (5mm)14.549419.398618.660316.2032
INF2Developing inflorescences (1-1.5 cm)25.606525.167724.962128.9607
ROORoots from the seedlings (10 cm shoot stage)5.745567.271828.822617.8493
NODDeveloping tillers at six leaf stage, 3rd internode3.600684.970631.8812210.9882
CAR5Developing grain, bracts removed (5 DPA)32.099830.517730.972931.9071
CAR15Developing grain, bracts removed (15 DPA)33.051237.033441.036695.572



CDS Structure of MLOC_65431






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65431.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65431.2CUST_14827_PI427708080AvailableAvailablecontig_50179 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g60720.1 -2 4e-166 476 214/239 (90%) 13103.m06667 protein expansin precursor, putative, expressed
TAIR PP10 AT2G39700.1 -2 5e-148 429 195/239 (82%) | Symbols: ATEXPA4, ATEXP4, ATHEXP ALPHA 1.6, EXPA4 | expansin A4 | chr2:16544246-16545434 REVERSE LENGTH=257