MLOC_65419 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5368510.5297170.5480580.579161
LEAShoots from the seedlings (10 cm shoot stage)1.106220.9740260.6442010.80091
INF1Young developing inflorescences (5mm)0.5914580.8056641.102510.72726
INF2Developing inflorescences (1-1.5 cm)0.8756180.6658150.3756470.761855
ROORoots from the seedlings (10 cm shoot stage)0.8518680.8830770.7728681.09859
NODDeveloping tillers at six leaf stage, 3rd internode1.088071.389381.640744.60527
CAR5Developing grain, bracts removed (5 DPA)3.614263.020483.641183.42714
CAR15Developing grain, bracts removed (15 DPA)1.373311.402281.138883.23218



CDS Structure of MLOC_65419






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65419.8
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371254NoneNoneNoneNone
MLOC_65419.8CUST_18320_PI427708080AvailableAvailablecontig_50116 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g14850.1 -3 0.0 759 553/1301 (43%) 13108.m01586 protein resistance protein, putative, expressed
TAIR PP10 AT1G58602.2 -3 4e-25 114 145/591 (25%) LRR and NB-ARC domains-containing disease resistance protein | chr1:21760167-21763765 FORWARD LENGTH=1138