- Predicted Gene MLOC_65390
MLOC_65390 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.221008 | 0.0905532 | 0.0288804 | 0.104862 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0681527 | 0 | 0.122758 | 0.0792169 |
| INF1 | Young developing inflorescences (5mm) | 0.0166904 | 0 | 0 | 0.0149589 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.99337 | 5.67674 | 4.17971 | 5.85739 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.136128 | 0.0726769 | 0.225005 | 0.286749 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0226705 | 0.0216599 | 0.0208149 | 0.0225596 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0145177 | 0.0171771 | 0.0205906 | 0.0462642 |
CDS Structure of MLOC_65390
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65390.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g20980.1 |
+3 |
0.0 |
889 |
452/519 (87%) |
13101.m02230 protein pectinesterase, putative, expressed |
| TAIR PP10 |
AT4G02330.1 |
+3 |
0.0 |
588 |
299/548 (55%) |
| Symbols: ATPMEPCRB | Plant invertase/pectin methylesterase inhibitor superfamily | chr4:1032479-1034928 FORWARD LENGTH=573 |