MLOC_65380 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.742986.525855.708096.00473
LEAShoots from the seedlings (10 cm shoot stage)10.17352.165342.935054.53557
INF1Young developing inflorescences (5mm)44.276338.943337.215935.4547
INF2Developing inflorescences (1-1.5 cm)61.852464.93556.255570.3914
ROORoots from the seedlings (10 cm shoot stage)2.179534.961373.913355.67805
NODDeveloping tillers at six leaf stage, 3rd internode2.551162.320413.360758.33981
CAR5Developing grain, bracts removed (5 DPA)12.795811.678810.141611.7722
CAR15Developing grain, bracts removed (15 DPA)2.869962.283682.95576.52527



CDS Structure of MLOC_65380






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65380.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375829NoneNoneNoneNone
MLOC_65380.1CUST_5170_PI427708080AvailableAvailablecontig_50099 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g33320.1 -1 0.0 1234 598/813 (74%) 13106.m03439 protein extra-large G-protein-related, putative, expressed
TAIR PP10 AT3G61670.1 -1 9e-104 348 276/849 (33%) Protein of unknown function (DUF3133) | chr3:22819052-22821870 FORWARD LENGTH=790