MLOC_65378 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains137.859118.226130.174131.095
LEAShoots from the seedlings (10 cm shoot stage)193.145197.271203.831161.296
INF1Young developing inflorescences (5mm)6.765438.271916.989436.8816
INF2Developing inflorescences (1-1.5 cm)7.30696.252746.992518.00459
ROORoots from the seedlings (10 cm shoot stage)650.721382.729309.252456.732
NODDeveloping tillers at six leaf stage, 3rd internode1747.712141.342277.635566.7
CAR5Developing grain, bracts removed (5 DPA)43.671750.650448.722551.1376
CAR15Developing grain, bracts removed (15 DPA)35.0436.364234.540593.0034



CDS Structure of MLOC_65378






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65378.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359402NoneNoneNoneNone
MLOC_65378.1CUST_18318_PI427708080AvailableAvailablecontig_50098 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g06100.1 +2 0.0 548 301/368 (82%) 13108.m00605 protein O-methyltransferase, putative, expressed
TAIR PP10 AT5G54160.1 +2 4e-144 424 216/339 (64%) | Symbols: ATOMT1, OMT1 | O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363