MLOC_65373 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.799428.198127.128525.452
LEAShoots from the seedlings (10 cm shoot stage)19.8112.486212.835611.9228
INF1Young developing inflorescences (5mm)35.926535.834532.393927.4389
INF2Developing inflorescences (1-1.5 cm)23.064820.692721.017521.9582
ROORoots from the seedlings (10 cm shoot stage)26.58625.002126.973426.3428
NODDeveloping tillers at six leaf stage, 3rd internode7.89376.418817.1492218.9057
CAR5Developing grain, bracts removed (5 DPA)25.448525.1326.470622.8363
CAR15Developing grain, bracts removed (15 DPA)8.054058.44937.7070817.8889



CDS Structure of MLOC_65373






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65373.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371514NoneNoneNoneNone
MLOC_65373.1CUST_5169_PI427708080AvailableAvailablecontig_50095 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g13330.1 +1 0.0 591 277/327 (85%) 13105.m01397 protein per1-like family protein, putative, expressed
TAIR PP10 AT1G16560.3 +1 1e-155 457 210/325 (65%) Per1-like family protein | chr1:5668945-5670343 FORWARD LENGTH=342