MLOC_65361 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains38.423632.11233.267537.5389
LEAShoots from the seedlings (10 cm shoot stage)15.7888.915598.877610.1999
INF1Young developing inflorescences (5mm)54.802152.819555.833151.4168
INF2Developing inflorescences (1-1.5 cm)49.242443.647551.343157.9298
ROORoots from the seedlings (10 cm shoot stage)31.805128.076133.575339.0222
NODDeveloping tillers at six leaf stage, 3rd internode8.557678.031498.6877930.2739
CAR5Developing grain, bracts removed (5 DPA)27.712330.277631.178633.2237
CAR15Developing grain, bracts removed (15 DPA)7.409936.397946.7455817.6344



CDS Structure of MLOC_65361






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65361.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376309NoneNoneNoneNone
MLOC_65361.1CUST_5166_PI427708080AvailableAvailablecontig_50080 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g08890.1 +1 2e-81 258 136/188 (72%) 13109.m00754 protein mitochondrial 60S ribosomal protein L5, putative, expressed
TAIR PP10 ATMG00210.1 +1 2e-61 200 109/184 (59%) | Symbols: RPL5 | ribosomal protein L5 | chrM:57774-58331 FORWARD LENGTH=185