MLOC_6534 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.05334 | 3.86452 | 4.57935 | 4.85235 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.60367 | 4.1578 | 3.93069 | 3.91466 |
| INF1 | Young developing inflorescences (5mm) | 10.6143 | 11.2073 | 12.2644 | 10.8779 |
| INF2 | Developing inflorescences (1-1.5 cm) | 16.3817 | 18.2777 | 15.8383 | 21.1635 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.2893 | 6.77183 | 6.15247 | 9.2914 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.61067 | 2.91513 | 3.39974 | 10.7487 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.58036 | 10.6192 | 8.99837 | 10.6436 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.59301 | 7.66112 | 7.90042 | 21.2963 |
CDS Structure of MLOC_6534
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6534.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g41070.1 |
-3 |
1e-134 |
402 |
236/307 (77%) |
13105.m04352 protein bZIP transcription factor, putative, expressed |
| TAIR PP10 |
AT3G56850.1 |
-3 |
1e-70 |
233 |
161/313 (51%) |
| Symbols: AREB3, DPBF3 | ABA-responsive element binding protein 3 | chr3:21046554-21047894 REVERSE LENGTH=297 |
