MLOC_65333 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains40.635531.628435.524634.7283
LEAShoots from the seedlings (10 cm shoot stage)23.933514.262414.379714.7331
INF1Young developing inflorescences (5mm)17.956916.82617.05914.9764
INF2Developing inflorescences (1-1.5 cm)21.029220.985924.541723.8102
ROORoots from the seedlings (10 cm shoot stage)42.424832.453435.131638.3667
NODDeveloping tillers at six leaf stage, 3rd internode55.505754.266739.5984145.867
CAR5Developing grain, bracts removed (5 DPA)33.692732.155633.491131.8242
CAR15Developing grain, bracts removed (15 DPA)10.34689.228549.3897322.9614



CDS Structure of MLOC_65333






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65333.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355956NoneNoneNoneNone
MLOC_65333.1CUST_5162_PI427708080AvailableAvailablecontig_50052 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g57240.1 -3 0.0 596 300/328 (91%) 13102.m06586 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed
TAIR PP10 AT1G04690.1 -3 0.0 560 279/328 (85%) | Symbols: KAB1, KV-BETA1 | potassium channel beta subunit 1 | chr1:1313662-1315420 FORWARD LENGTH=328