- Predicted Gene MLOC_65332
MLOC_65332 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.7008 | 8.01286 | 8.35721 | 9.99488 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 29.7337 | 45.431 | 49.6584 | 37.2716 |
| INF1 | Young developing inflorescences (5mm) | 17.0824 | 17.8475 | 21.6399 | 18.3324 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.0987 | 28.5356 | 28.2369 | 36.1204 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 28.5711 | 15.6506 | 18.4102 | 23.516 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 35.3794 | 66.1257 | 104.87 | 242.324 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.90924 | 4.3429 | 2.63556 | 4.59847 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.712806 | 0.654896 | 0.970844 | 2.03247 |
CDS Structure of MLOC_65332
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65332.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g57250.2 |
+2 |
2e-107 |
326 |
183/230 (80%) |
13102.m06588 protein OsIAA10 - Auxin-responsive Aux/IAA gene family member, expressed |
| TAIR PP10 |
AT2G33310.3 |
+2 |
2e-47 |
167 |
102/188 (54%) |
| Symbols: IAA13 | auxin-induced protein 13 | chr2:14114569-14115757 REVERSE LENGTH=246 |
