MLOC_6533 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.08828 | 4.60233 | 6.14319 | 6.18536 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.7217 | 1.13784 | 2.6452 | 2.60752 |
| INF1 | Young developing inflorescences (5mm) | 8.39053 | 7.80526 | 8.77844 | 8.53103 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.96948 | 9.45679 | 7.18045 | 10.7184 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.28827 | 4.77476 | 4.99971 | 7.66793 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.0596 | 7.41572 | 4.22889 | 25.0243 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.16705 | 7.52167 | 6.48504 | 8.28577 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.971433 | 0.953954 | 1.14903 | 2.91406 |
CDS Structure of MLOC_6533
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6533.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g41080.2 |
+3 |
1e-60 |
194 |
106/167 (63%) |
13105.m04353 protein histone H3, putative, expressed |
| TAIR PP10 |
AT1G75600.1 |
+3 |
8e-33 |
120 |
63/100 (63%) |
Histone superfamily protein | chr1:28390753-28391461 FORWARD LENGTH=136 |
