MLOC_65319 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.575653.834984.265233.87059
LEAShoots from the seedlings (10 cm shoot stage)7.372757.830347.501386.16815
INF1Young developing inflorescences (5mm)2.932173.738164.235342.9291
INF2Developing inflorescences (1-1.5 cm)3.052313.576853.311683.51008
ROORoots from the seedlings (10 cm shoot stage)5.951237.951166.44288.30617
NODDeveloping tillers at six leaf stage, 3rd internode7.993068.467239.4836724.8143
CAR5Developing grain, bracts removed (5 DPA)3.837593.437333.634553.35435
CAR15Developing grain, bracts removed (15 DPA)1.416271.756371.231873.42177



CDS Structure of MLOC_65319






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65319.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357894NoneNoneNoneNone
MLOC_65319.1CUST_5159_PI427708080AvailableAvailablecontig_50040 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g16410.1 -2 0.0 1449 780/973 (80%) 13106.m01811 protein armadillo/beta-catenin repeat family protein, putative, expressed
TAIR PP10 AT1G68940.1 -2 0.0 624 363/815 (45%) Armadillo/beta-catenin-like repeat family protein | chr1:25922001-25925374 REVERSE LENGTH=1033