- Predicted Gene MLOC_65318
MLOC_65318 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.1304 | 14.7296 | 14.0011 | 15.7945 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.05051 | 5.59725 | 6.58748 | 5.47695 |
| INF1 | Young developing inflorescences (5mm) | 18.3988 | 19.4806 | 16.8061 | 16.1095 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.2922 | 21.7065 | 18.3116 | 23.052 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.05146 | 11.2903 | 9.7186 | 13.6698 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.67325 | 7.83351 | 6.4327 | 26.8268 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.9767 | 13.618 | 16.3187 | 15.3661 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.87915 | 4.14153 | 4.17243 | 10.7104 |
CDS Structure of MLOC_65318
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65318.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g16400.2 |
+2 |
1e-162 |
479 |
264/436 (61%) |
13106.m01810 protein helix-loop-helix DNA-binding domain containing protein, expressed |
| TAIR PP10 |
AT1G68920.2 |
+2 |
4e-62 |
217 |
147/356 (41%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:25915620-25917675 FORWARD LENGTH=486 |