MLOC_65300 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.522050.1212920.182420.267043
LEAShoots from the seedlings (10 cm shoot stage)0.8581070.888350.3797350.695178
INF1Young developing inflorescences (5mm)0.7046250.8372360.7392510.7424
INF2Developing inflorescences (1-1.5 cm)0.2176540.7940971.340650.916935
ROORoots from the seedlings (10 cm shoot stage)0.4424560.1377670.7872610.417074
NODDeveloping tillers at six leaf stage, 3rd internode1.034213.577961.2190112.6835
CAR5Developing grain, bracts removed (5 DPA)000.2860460.529504
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_65300






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65300.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65300.1CUST_8821_PI427708083AvailableAvailablecontig_50020 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g36640.1 -1 2e-33 126 65/134 (49%) 13101.m03710 protein disease resistance protein RPM1, putative, expressed
TAIR PP10 AT3G46530.1 -1 9e-11 60 37/132 (28%) | Symbols: RPP13 | NB-ARC domain-containing disease resistance protein | chr3:17130739-17133246 REVERSE LENGTH=835