MLOC_653 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)6.160045.083913.290265.56464
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_653






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_653.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_653.1CUST_8819_PI427708083AvailableAvailablecontig_104845 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g44640.3 -3 1e-91 280 134/165 (81%) 13108.m09400 protein OsSCP41 - Putative Serine Carboxypeptidase homologue, expressed
TAIR PP10 AT2G27920.1 -3 1e-68 220 98/154 (64%) | Symbols: SCPL51 | serine carboxypeptidase-like 51 | chr2:11885777-11889043 REVERSE LENGTH=461