MLOC_65292 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.005512.263814.104211.9061
LEAShoots from the seedlings (10 cm shoot stage)11.35266.533768.060386.45695
INF1Young developing inflorescences (5mm)3.776743.642433.660223.0874
INF2Developing inflorescences (1-1.5 cm)3.826153.727273.670523.96105
ROORoots from the seedlings (10 cm shoot stage)22.058515.803513.110715.8696
NODDeveloping tillers at six leaf stage, 3rd internode34.929423.882632.057959.4208
CAR5Developing grain, bracts removed (5 DPA)10.389711.553412.057810.3825
CAR15Developing grain, bracts removed (15 DPA)2.375532.114922.968465.81211



CDS Structure of MLOC_65292






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65292.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370168NoneNoneNoneNone
MLOC_65292.1CUST_5150_PI427708080AvailableAvailablecontig_50013 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18890.1 -1 0.0 662 337/360 (94%) 13103.m02262 protein glycosyl transferase 8 domain containing protein, putative, expressed
TAIR PP10 AT3G62660.1 -1 4e-174 515 265/360 (74%) | Symbols: GATL7 | galacturonosyltransferase-like 7 | chr3:23173419-23174504 FORWARD LENGTH=361