MLOC_65284 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.656786.52615.675317.36607
LEAShoots from the seedlings (10 cm shoot stage)9.0517315.528821.793214.2625
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)000.04571290.0465143
ROORoots from the seedlings (10 cm shoot stage)38.14318.580515.86726.6019
NODDeveloping tillers at six leaf stage, 3rd internode3.354554.266532.5523811.3614
CAR5Developing grain, bracts removed (5 DPA)0.136250.216750.08459040.185369
CAR15Developing grain, bracts removed (15 DPA)0.3983790.5037570.3141371.21547



CDS Structure of MLOC_65284






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65284.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364691NoneNoneNoneNone
MLOC_65284.2CUST_5148_PI427708080AvailableAvailablecontig_50002 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g70210.1 +2 1e-120 351 170/222 (77%) 13101.m07621 protein CRAL/TRIO domain containing protein, expressed
TAIR PP10 AT1G01630.1 +2 1e-68 217 103/212 (49%) Sec14p-like phosphatidylinositol transfer family protein | chr1:229206-230675 FORWARD LENGTH=255