MLOC_6528 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.83562 | 1.39514 | 1.74583 | 1.28126 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.44071 | 1.58987 | 3.06428 | 1.30543 |
| INF1 | Young developing inflorescences (5mm) | 1.42906 | 1.60222 | 1.77698 | 1.02193 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.57312 | 1.65872 | 1.77025 | 1.39546 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.77709 | 3.30364 | 2.14882 | 2.72738 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.39653 | 1.86715 | 2.72077 | 4.86965 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.04034 | 2.05635 | 1.84113 | 1.43071 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.50545 | 1.50295 | 1.63854 | 2.67091 |
CDS Structure of MLOC_6528
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6528.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g15790.1 |
+1 |
1e-83 |
273 |
137/144 (95%) |
13109.m01498 protein ras-related protein, putative, expressed |
| TAIR PP10 |
AT5G60860.1 |
+1 |
3e-80 |
263 |
131/144 (91%) |
| Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F | chr5:24484750-24485565 FORWARD LENGTH=217 |