- Predicted Gene MLOC_65279
MLOC_65279 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.37483 | 2.99535 | 3.09242 | 2.78677 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.29843 | 1.11281 | 0.898521 | 1.2419 |
| INF1 | Young developing inflorescences (5mm) | 9.2628 | 10.3079 | 11.6941 | 8.23736 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.1989 | 18.763 | 17.0284 | 19.5466 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.11824 | 3.00525 | 3.08959 | 3.13162 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.279265 | 0.546809 | 0.934707 | 2.00811 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.57732 | 5.60082 | 5.04024 | 4.7163 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.04757 | 0.782723 | 1.01287 | 2.08117 |
CDS Structure of MLOC_65279
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65279.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g56950.1 |
-3 |
4e-173 |
511 |
257/401 (64%) |
13102.m06548 protein expressed protein |
| TAIR PP10 |
AT5G44010.1 |
-3 |
9e-58 |
202 |
129/390 (33%) |
unknown protein; Has 28 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:17707224-17709199 REVERSE LENGTH=357 |