- Predicted Gene MLOC_65275
MLOC_65275 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.6007 | 17.7474 | 16.7065 | 14.7633 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.8776 | 13.5696 | 16.6258 | 13.23 |
| INF1 | Young developing inflorescences (5mm) | 35.6904 | 40.174 | 37.1285 | 29.8809 |
| INF2 | Developing inflorescences (1-1.5 cm) | 39.583 | 42.8118 | 39.8806 | 42.2672 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.746 | 18.8636 | 16.363 | 20.6198 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.12887 | 10.7968 | 10.3482 | 33.7066 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.8192 | 27.4046 | 29.6066 | 25.1925 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.1729 | 15.0365 | 12.9635 | 31.0975 |
CDS Structure of MLOC_65275
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65275.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g06890.1 |
+3 |
0.0 |
821 |
474/691 (69%) |
13112.m00713 protein OsNucAP3 - Putative Nucleoporin Autopeptidase homologue, expressed |
| TAIR PP10 |
AT1G10390.2 |
+3 |
2e-160 |
506 |
340/757 (45%) |
Nucleoporin autopeptidase | chr1:3407265-3412045 REVERSE LENGTH=1041 |