MLOC_65264 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.048811.10329.1725710.4997
LEAShoots from the seedlings (10 cm shoot stage)8.409725.607837.290415.7786
INF1Young developing inflorescences (5mm)10.123710.501711.4788.82701
INF2Developing inflorescences (1-1.5 cm)8.717849.112788.701899.46067
ROORoots from the seedlings (10 cm shoot stage)7.903935.988185.647986.9008
NODDeveloping tillers at six leaf stage, 3rd internode1.835892.560714.486778.70098
CAR5Developing grain, bracts removed (5 DPA)8.680749.030428.525568.20927
CAR15Developing grain, bracts removed (15 DPA)3.635563.10822.934717.5145



CDS Structure of MLOC_65264






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65264.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372162NoneNoneNoneNone
MLOC_65264.2CUST_5143_PI427708080AvailableAvailablecontig_49981 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50100.1 +3 0.0 716 381/438 (87%) 13102.m05690 protein SET domain-containing protein, putative, expressed
TAIR PP10 AT1G24610.1 +3 1e-172 501 256/448 (57%) Rubisco methyltransferase family protein | chr1:8720906-8722711 REVERSE LENGTH=476