MLOC_65259 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.435492.806463.414283.16245
LEAShoots from the seedlings (10 cm shoot stage)1.585834.3290317.39546.61608
INF1Young developing inflorescences (5mm)0.1246040.04762790.05195930.0676369
INF2Developing inflorescences (1-1.5 cm)000.2039420.188694
ROORoots from the seedlings (10 cm shoot stage)5.857624.027862.678914.6594
NODDeveloping tillers at six leaf stage, 3rd internode00.008572780.0699770.101509
CAR5Developing grain, bracts removed (5 DPA)0.3010540.0472950.09860950.161851
CAR15Developing grain, bracts removed (15 DPA)0.03840720.087698400.211644



CDS Structure of MLOC_65259






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65259.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359599NoneNoneNoneNone
MLOC_65259.2CUST_5140_PI427708080AvailableAvailablecontig_49971 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g38710.1 +2 3e-85 261 142/226 (63%) 13110.m03526 protein glutathione S-transferase, putative, expressed
TAIR PP10 AT1G10370.1 +2 2e-51 172 98/220 (45%) | Symbols: GST30, ATGSTU17, GST30B, ERD9 | Glutathione S-transferase family protein | chr1:3397274-3398273 REVERSE LENGTH=227