MLOC_65248 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.226415.050213.510315.7162
LEAShoots from the seedlings (10 cm shoot stage)9.1177625.714524.379916.8899
INF1Young developing inflorescences (5mm)0.046444900.08852270.0713623
INF2Developing inflorescences (1-1.5 cm)0.024268400.1788760.0910729
ROORoots from the seedlings (10 cm shoot stage)24.125924.349326.563629.091
NODDeveloping tillers at six leaf stage, 3rd internode5.013525.3410218.296323.7582
CAR5Developing grain, bracts removed (5 DPA)7.727119.096347.879358.89441
CAR15Developing grain, bracts removed (15 DPA)1.131071.654751.684253.86883



CDS Structure of MLOC_65248






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65248.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367746NoneNoneNoneNone
MLOC_65248.1CUST_5137_PI427708080AvailableAvailablecontig_49953 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g01030.1 +1 1e-137 405 215/327 (66%) 13112.m00003 protein monoglyceride lipase, putative
TAIR PP10 AT2G39420.1 +1 2e-115 347 171/295 (58%) alpha/beta-Hydrolases superfamily protein | chr2:16460442-16462872 FORWARD LENGTH=317