MLOC_65245 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains191.048168.317179.615183.908
LEAShoots from the seedlings (10 cm shoot stage)25.513615.965913.933215.4066
INF1Young developing inflorescences (5mm)23.433410.834415.311815.0309
INF2Developing inflorescences (1-1.5 cm)4.039556.61559.131687.65005
ROORoots from the seedlings (10 cm shoot stage)3.3065812.939815.966214.8028
NODDeveloping tillers at six leaf stage, 3rd internode0.01431760.05239220.04241460.158013
CAR5Developing grain, bracts removed (5 DPA)8.570686.047198.988138.25629
CAR15Developing grain, bracts removed (15 DPA)0.328260.3590430.5918361.06601



CDS Structure of MLOC_65245






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65245.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252107.1NoneNoneNoneNone
MLOC_65245.1CUST_18316_PI427708080AvailableAvailablecontig_49949 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g36830.1 -1 0.0 650 328/485 (68%) 13102.m04023 protein cytokinin-O-glucosyltransferase 2, putative, expressed
TAIR PP10 AT1G22360.1 -1 4e-159 471 242/483 (50%) | Symbols: AtUGT85A2, UGT85A2 | UDP-glucosyl transferase 85A2 | chr1:7895068-7897527 REVERSE LENGTH=481