MLOC_65244 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains68.369468.970866.534875.6323
LEAShoots from the seedlings (10 cm shoot stage)8.841962.739363.934974.36808
INF1Young developing inflorescences (5mm)1.924670.3831850.6701960.894755
INF2Developing inflorescences (1-1.5 cm)0.02748320.02628420.03307720.0352362
ROORoots from the seedlings (10 cm shoot stage)1.004463.548954.417624.36834
NODDeveloping tillers at six leaf stage, 3rd internode0.02134130.02424860.009248490.0654287
CAR5Developing grain, bracts removed (5 DPA)0.1641760.2798210.1266730.226586
CAR15Developing grain, bracts removed (15 DPA)0.0233202000.0819004



CDS Structure of MLOC_65244






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65244.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374567NoneNoneNoneNone
MLOC_65244.2NoneAvailableAvailablecontig_49949 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g29470.1 -1 0.0 527 274/357 (77%) 13110.m02522 protein dehydrogenase, putative, expressed
TAIR PP10 AT4G37990.1 -1 6e-144 419 217/358 (61%) | Symbols: ELI3-2, ELI3, ATCAD8, CAD-B2 | elicitor-activated gene 3-2 | chr4:17855964-17857388 FORWARD LENGTH=359